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S*R for your RNA
v1.1.1-dev docs
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S*R for your RNA
v1.1.1-dev docs
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    • sugar.core package
      • sugar.core.seq module
      • sugar.core.fts module
      • sugar.core.meta module
      • sugar.core.cane module
      • sugar.core._adapter module
    • sugar._io package
      • sugar._io.main module
      • sugar._io.clustal module
      • sugar._io.embl module
      • sugar._io.fasta module
      • sugar._io.genbank module
      • sugar._io.gff module
      • sugar._io.meme module
      • sugar._io.sjson module
      • sugar._io.stockholm module
      • sugar._io.tab.blast module
      • sugar._io.tab.core module
      • sugar._io.tab.infernal module
      • sugar._io.tab.mmseqs module
      • sugar._io.tab.xsv module
    • sugar.imaging package
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      • sugar.index.fastaindex module
    • sugar.data package
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      • sugar.web._entrez module
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sugar.core package¶

sugar.core – Sequence and feature classes

Submodules¶

seq

Sequence related classes, BioSeq, BioBasket

fts

Feature related classes Feature, FeatureList, Location, Strand, Defect

cane

Several core helper classes and functions, such as translate(), match(), and find_orfs()

meta

Metadata related classes, Attr and Meta

_adapter

Adapters for other bio libraries

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sugar.core.seq module
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